HPVomics

A therapeutic and epitome resource for Human Papillomaviruses

Efficient putative LR-HPVs E1^E4 protein epitopes (MHC-II Binders)

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S.No.	HPV type	Target region	Peptide seuences	Start	End	Allele	Method	Percentile rank
1	HPV54	E1^E4	RHCQYPLLALLNTPD	9	23	HLA-DRB1*04:05	Consensus	0.05
2	HPV54	E1^E4	HCQYPLLALLNTPDQ	10	24	HLA-DRB1*04:05	Consensus	0.05
3	HPV54	E1^E4	CQYPLLALLNTPDQP	11	25	HLA-DRB1*04:05	Consensus	0.05
4	HPV54	E1^E4	QYPLLALLNTPDQPI	12	26	HLA-DRB1*04:05	Consensus	0.05
5	HPV54	E1^E4	YPLLALLNTPDQPIP	13	27	HLA-DRB1*04:05	Consensus	0.05
6	HPV54	E1^E4	PLLALLNTPDQPIPH	14	28	HLA-DRB1*04:05	Consensus	0.25
7	HPV54	E1^E4	LLALLNTPDQPIPHH	15	29	HLA-DRB1*04:05	Consensus	0.25
8	HPV11	E1^E4	SALYEKYPLLNLLHT	5	19	HLA-DPA1*03:01/DPB1*04:02	Consensus	0.4
9	HPV43	E1^E4	KYPLLRLLNLTPDQR	10	24	HLA-DRB1*04:05	Consensus	0.45
10	HPV43	E1^E4	SVKYPLLRLLNLTPD	8	22	HLA-DRB1*04:05	Consensus	0.46
11	HPV43	E1^E4	VKYPLLRLLNLTPDQ	9	23	HLA-DRB1*04:05	Consensus	0.46
12	HPV43	E1^E4	YPLLRLLNLTPDQRP	11	25	HLA-DRB1*04:05	Consensus	0.48
13	HPV11	E1^E4	ALYEKYPLLNLLHTP	6	20	HLA-DPA1*03:01/DPB1*04:02	Consensus	0.54
14	HPV11	E1^E4	DSALYEKYPLLNLLH	4	18	HLA-DPA1*03:01/DPB1*04:02	Consensus	0.73
15	HPV43	E1^E4	VPSVKYPLLRLLNLT	6	20	HLA-DPA1*03:01/DPB1*04:02	Consensus	0.8
16	HPV43	E1^E4	QVPSVKYPLLRLLNL	5	19	HLA-DPA1*03:01/DPB1*04:02	Consensus	0.83